Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN06297358_1264 | Not Available | Negative | 1578436 - 1579023 | 23154.0 |
| pas domain s-box-containing protein | SAMN06297358_1265 | Not Available | Negative | 1579227 - 1580597 | 52846.9 |
| abc-2 type transport system atp-binding protein | SAMN06297358_1266 | Not Available | Negative | 1581525 - 1582220 | 25234.6 |
| abc-2 type transport system permease protein | SAMN06297358_1267 | Not Available | Negative | 1582214 - 1583560 | 51379.6 |
| abc-2 type transport system permease protein | SAMN06297358_1268 | Not Available | Negative | 1583560 - 1584996 | 54453.7 |
| hypothetical protein | SAMN06297358_1269 | Not Available | Negative | 1585612 - 1586085 | 17764.7 |
| gtpase, g3e family | SAMN06297358_1270 | Not Available | Negative | 1586101 - 1587396 | 49279.2 |
| amino acid/polyamine/organocation transporter, apc superfamily | SAMN06297358_1271 | Not Available | Negative | 1587432 - 1588622 | 43245.0 |
| hypothetical protein | SAMN06297358_1272 | Not Available | Negative | 1588609 - 1589493 | 33428.2 |
| hypothetical protein | SAMN06297358_1273 | Not Available | Negative | 1589508 - 1591058 | 58249.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

