Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate isomerase/epimerase | SAMN06297358_1254 | Not Available | Negative | 1561961 - 1562884 | 34841.8 |
| predicted protein | SAMN06297358_1255 | Not Available | Negative | 1562908 - 1563849 | 35373.8 |
| oxidoreductase family, c-terminal alpha/beta domain | SAMN06297358_1256 | Not Available | Negative | 1563855 - 1565252 | 52175.1 |
| exopolysaccharide biosynthesis protein | SAMN06297358_1257 | Not Available | Negative | 1565337 - 1566257 | 33627.8 |
| por secretion system c-terminal sorting domain-containing protein | SAMN06297358_1258 | Not Available | Negative | 1566257 - 1569184 | 105629.0 |
| nhl repeat-containing protein | SAMN06297358_1259 | Not Available | Negative | 1569372 - 1570769 | 48854.0 |
| hypothetical protein | SAMN06297358_1260 | Not Available | Negative | 1570759 - 1572057 | 47006.1 |
| starch-binding associating with outer membrane | SAMN06297358_1261 | Not Available | Negative | 1572070 - 1573503 | 54661.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06297358_1262 | Not Available | Negative | 1573516 - 1576971 | 127060.0 |
| fecr family protein | SAMN06297358_1263 | Not Available | Negative | 1577100 - 1578302 | 44988.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

