Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_1239 | Not Available | Positive | 1550524 - 1551285 | 29292.0 |
| cold shock protein (beta-ribbon, cspa family) | SAMN06297358_1240 | Not Available | Negative | 1551353 - 1551544 | 6923.08 |
| ferritin-like metal-binding protein ycie | SAMN06297358_1242 | Not Available | Negative | 1552061 - 1552591 | 20230.5 |
| response regulator receiver domain-containing protein | SAMN06297358_1243 | Not Available | Negative | 1552598 - 1552963 | 13488.5 |
| h+/cl- antiporter clca | SAMN06297358_1245 | Not Available | Negative | 1554755 - 1556062 | 47059.1 |
| response regulator receiver domain-containing protein | SAMN06297358_1247 | Not Available | Positive | 1556540 - 1556905 | 13608.3 |
| hypothetical protein | SAMN06297358_1248 | Not Available | Negative | 1556774 - 1557082 | 11773.6 |
| na+:h+ antiporter, nhaa family | SAMN06297358_1249 | Not Available | Negative | 1557072 - 1558427 | 49125.2 |
| hypothetical protein | SAMN06297358_1250 | Not Available | Positive | 1559187 - 1559351 | 6131.03 |
| two component transcriptional regulator, lyttr family | SAMN06297358_1251 | Not Available | Negative | 1559369 - 1560064 | 26648.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

