Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_1229 | Not Available | Negative | 1536844 - 1537575 | 26999.8 |
| hexosaminidase | SAMN06297358_1230 | Not Available | Negative | 1537685 - 1539334 | 62206.0 |
| hexosaminidase | SAMN06297358_1231 | Not Available | Negative | 1539347 - 1541869 | 95088.5 |
| starch-binding associating with outer membrane | SAMN06297358_1232 | Not Available | Negative | 1541893 - 1543338 | 53948.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06297358_1233 | Not Available | Negative | 1543382 - 1546633 | 118263.0 |
| fecr family protein | SAMN06297358_1234 | Not Available | Negative | 1546772 - 1547959 | 44437.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN06297358_1235 | Not Available | Negative | 1548029 - 1548619 | 22850.4 |
| hypothetical protein | SAMN06297358_1236 | Not Available | Negative | 1549037 - 1549288 | 9375.5 |
| hsp20 family protein | SAMN06297358_1237 | Not Available | Negative | 1549382 - 1549825 | 16719.6 |
| hypothetical protein | SAMN06297358_1238 | Not Available | Negative | 1550229 - 1550342 | 4024.05 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

