Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two component transcriptional regulator, luxr family | SAMN06297358_1217 | Not Available | Positive | 1516185 - 1516811 | 23604.6 |
| hypothetical protein | SAMN06297358_1218 | Not Available | Positive | 1517046 - 1521958 | 172784.0 |
| conserved repeat domain-containing protein/gliding motility-associated c-terminal domain-containing protein | SAMN06297358_1219 | Not Available | Positive | 1521959 - 1524811 | 98969.0 |
| type ix secretion system membrane protein, porp/sprf family | SAMN06297358_1220 | Not Available | Positive | 1524815 - 1525744 | 34182.8 |
| anaphase-promoting complex, cyclosome, subunit 3 | SAMN06297358_1221 | Not Available | Positive | 1525763 - 1527928 | 80967.2 |
| anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) | SAMN06297358_1222 | Not Available | Positive | 1528088 - 1528471 | 13988.2 |
| lipocalin-like domain-containing protein | SAMN06297358_1223 | Not Available | Positive | 1528975 - 1529394 | 16289.2 |
| pas domain s-box-containing protein | SAMN06297358_1224 | Not Available | Positive | 1529564 - 1532491 | 109773.0 |
| hypothetical protein | SAMN06297358_1227 | Not Available | Positive | 1535361 - 1535510 | 5659.63 |
| wd40-like beta propeller repeat | SAMN06297358_1228 | Not Available | Negative | 1535779 - 1536804 | 37360.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

