Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN06297358_1194 | Not Available | Positive | 1488703 - 1489446 | 27645.0 |
| type ix secretion system membrane protein, porp/sprf family | SAMN06297358_1195 | Not Available | Negative | 1489952 - 1490869 | 33212.9 |
| gliding motility-associated c-terminal domain-containing protein | SAMN06297358_1196 | Not Available | Negative | 1490878 - 1496268 | 181876.0 |
| hypothetical protein | SAMN06297358_1197 | Not Available | Positive | 1496337 - 1497338 | 37246.0 |
| microcystin-dependent protein | SAMN06297358_1198 | Not Available | Negative | 1497335 - 1497937 | 20677.4 |
| microcystin-dependent protein | SAMN06297358_1199 | Not Available | Negative | 1497953 - 1498552 | 20760.4 |
| microcystin-dependent protein | SAMN06297358_1200 | Not Available | Negative | 1498565 - 1499161 | 20416.7 |
| methionyl-trna formyltransferase | SAMN06297358_1201 | Not Available | Negative | 1499173 - 1500099 | 34530.9 |
| abc-type branched-chain amino acid transport system, substrate-binding protein | SAMN06297358_1202 | Not Available | Negative | 1500116 - 1501240 | 41632.6 |
| 5'-nucleotidase | SAMN06297358_1203 | Not Available | Positive | 1501468 - 1502472 | 36851.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

