Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted dehydrogenase | SAMN06297358_1184 | Not Available | Negative | 1472420 - 1473619 | 44807.8 |
| glycosyl hydrolases family 43 | SAMN06297358_1185 | Not Available | Negative | 1473654 - 1474652 | 37603.6 |
| aldose 1-epimerase | SAMN06297358_1186 | Not Available | Negative | 1474832 - 1475959 | 41659.5 |
| hypothetical protein | SAMN06297358_1187 | Not Available | Negative | 1475988 - 1478009 | 76417.3 |
| starch-binding associating with outer membrane | SAMN06297358_1188 | Not Available | Negative | 1478161 - 1479834 | 62087.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06297358_1189 | Not Available | Negative | 1479840 - 1483169 | 122866.0 |
| fecr family protein | SAMN06297358_1190 | Not Available | Negative | 1483323 - 1484372 | 39297.9 |
| f5/8 type c domain-containing protein | SAMN06297358_1191 | Not Available | Negative | 1484481 - 1486109 | 60786.1 |
| rna polymerase sigma factor, sigma-70 family | SAMN06297358_1192 | Not Available | Positive | 1486363 - 1486986 | 24972.8 |
| predicted dehydrogenase | SAMN06297358_1193 | Not Available | Positive | 1487309 - 1488661 | 50905.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

