Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fasciclin domain-containing protein | SAMN06297358_1174 | Not Available | Negative | 1454443 - 1455774 | 49075.8 |
| fasciclin domain-containing protein | SAMN06297358_1175 | Not Available | Negative | 1455779 - 1456816 | 38036.1 |
| hypothetical protein | SAMN06297358_1176 | Not Available | Negative | 1456854 - 1458086 | 46085.8 |
| hypothetical protein | SAMN06297358_1177 | Not Available | Negative | 1458086 - 1459816 | 63601.4 |
| tonb-dependent receptor | SAMN06297358_1178 | Not Available | Negative | 1459816 - 1463376 | 131776.0 |
| fecr family protein | SAMN06297358_1179 | Not Available | Negative | 1463518 - 1464567 | 39909.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN06297358_1180 | Not Available | Negative | 1464634 - 1465188 | 22252.3 |
| swim zinc finger | SAMN06297358_1181 | Not Available | Negative | 1465469 - 1467127 | 63472.7 |
| wgr domain-containing protein | SAMN06297358_1182 | Not Available | Negative | 1467132 - 1470458 | 126725.0 |
| rna-directed dna polymerase | SAMN06297358_1183 | Not Available | Negative | 1470471 - 1472000 | 58831.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

