Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat-containing protein | SAMN06297358_1164 | Not Available | Positive | 1441916 - 1443694 | 66702.7 |
| hypothetical protein | SAMN06297358_1165 | Not Available | Positive | 1443711 - 1444430 | 27000.7 |
| hypothetical protein | SAMN06297358_1166 | Not Available | Positive | 1444423 - 1444836 | 15453.0 |
| hypothetical protein | SAMN06297358_1167 | Not Available | Negative | 1444833 - 1446041 | 46630.4 |
| hypothetical protein | SAMN06297358_1168 | Not Available | Positive | 1446328 - 1447137 | 31359.6 |
| hypothetical protein | SAMN06297358_1169 | Not Available | Positive | 1447222 - 1447527 | 11828.3 |
| hypothetical protein | SAMN06297358_1170 | Not Available | Negative | 1447614 - 1447880 | 10136.0 |
| ipt/tig domain-containing protein | SAMN06297358_1171 | Not Available | Negative | 1447941 - 1450109 | 74714.0 |
| carboxypeptidase regulatory-like domain-containing protein | SAMN06297358_1172 | Not Available | Negative | 1450144 - 1453377 | 119570.0 |
| uncaracterized surface protein containing fasciclin (fas1) repeats | SAMN06297358_1173 | Not Available | Negative | 1453434 - 1454441 | 36347.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

