Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_1154 | Not Available | Positive | 1432603 - 1433217 | 23709.3 |
| e3 ubiquitin ligase | SAMN06297358_1155 | Not Available | Positive | 1433252 - 1434289 | 39503.6 |
| hypothetical protein | SAMN06297358_1156 | Not Available | Positive | 1434286 - 1435263 | 37972.4 |
| hypothetical protein | SAMN06297358_1157 | Not Available | Positive | 1435303 - 1436259 | 36980.8 |
| hypothetical protein | SAMN06297358_1158 | Not Available | Positive | 1436262 - 1436843 | 22309.7 |
| vancomycin resistance protein vanw | SAMN06297358_1159 | Not Available | Positive | 1436843 - 1437661 | 31877.6 |
| hypothetical protein | SAMN06297358_1160 | Not Available | Positive | 1438130 - 1439209 | 40737.8 |
| hypothetical protein | SAMN06297358_1161 | Not Available | Positive | 1439238 - 1439762 | 20044.9 |
| hypothetical protein | SAMN06297358_1162 | Not Available | Positive | 1439766 - 1440527 | 28197.8 |
| hypothetical protein | SAMN06297358_1163 | Not Available | Positive | 1441000 - 1441893 | 35321.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

