Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| por secretion system c-terminal sorting domain-containing protein | SAMN06297358_1144 | Not Available | Negative | 1415562 - 1418855 | 116199.0 |
| por secretion system c-terminal sorting domain-containing protein | SAMN06297358_1145 | Not Available | Negative | 1419314 - 1422682 | 116475.0 |
| two component transcriptional regulator, lyttr family | SAMN06297358_1146 | Not Available | Negative | 1423866 - 1424621 | 29027.1 |
| histidine kinase | SAMN06297358_1147 | Not Available | Negative | 1424611 - 1425672 | 40837.1 |
| hypothetical protein | SAMN06297358_1148 | Not Available | Positive | 1426110 - 1426238 | 4885.91 |
| hrdc domain-containing protein | SAMN06297358_1149 | Not Available | Positive | 1426402 - 1428483 | 78089.1 |
| two component transcriptional regulator, lyttr family | SAMN06297358_1150 | Not Available | Positive | 1428740 - 1429492 | 28703.9 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN06297358_1151 | Not Available | Positive | 1429492 - 1431444 | 74578.4 |
| hypothetical protein | SAMN06297358_1152 | Not Available | Positive | 1431584 - 1432027 | 17011.9 |
| ahpc/tsa family protein | SAMN06297358_1153 | Not Available | Positive | 1432036 - 1432602 | 20746.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

