Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| right handed beta helix region | SAMN06297358_1134 | Not Available | Negative | 1398276 - 1399826 | 57119.4 |
| fasciclin domain-containing protein | SAMN06297358_1135 | Not Available | Negative | 1399829 - 1401319 | 54160.4 |
| starch-binding associating with outer membrane | SAMN06297358_1136 | Not Available | Negative | 1401334 - 1402758 | 53827.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06297358_1137 | Not Available | Negative | 1402763 - 1405864 | 113008.0 |
| hypothetical protein | SAMN06297358_1138 | Not Available | Negative | 1405861 - 1406001 | 5200.17 |
| transcriptional regulator, laci family | SAMN06297358_1139 | Not Available | Negative | 1406993 - 1408174 | 45196.4 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN06297358_1140 | Not Available | Negative | 1408211 - 1409677 | 54219.6 |
| hydrophobe/amphiphile efflux-1 (hae1) family protein | SAMN06297358_1141 | Not Available | Negative | 1409712 - 1412867 | 114127.0 |
| membrane fusion protein, multidrug efflux system | SAMN06297358_1142 | Not Available | Negative | 1412899 - 1414017 | 39672.8 |
| nucleotide-binding universal stress protein, uspa family | SAMN06297358_1143 | Not Available | Positive | 1414425 - 1415234 | 30572.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

