Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN06297358_1124 | Not Available | Positive | 1386957 - 1387427 | 17568.8 |
| hypothetical protein | SAMN06297358_1125 | Not Available | Positive | 1387428 - 1387580 | 5727.93 |
| glucosamine-6-phosphate deaminase | SAMN06297358_1126 | Not Available | Negative | 1387655 - 1388413 | 28000.1 |
| carbohydrate-binding family 9 | SAMN06297358_1127 | Not Available | Negative | 1388464 - 1389105 | 24321.0 |
| n-acetylglucosamine 6-phosphate deacetylase | SAMN06297358_1128 | Not Available | Negative | 1389242 - 1390435 | 43251.9 |
| glucose/galactose transporter | SAMN06297358_1129 | Not Available | Negative | 1390428 - 1391768 | 49143.4 |
| hexosaminidase | SAMN06297358_1130 | Not Available | Negative | 1391775 - 1394321 | 95599.2 |
| glycosyl hydrolase family 20, catalytic domain | SAMN06297358_1131 | Not Available | Negative | 1394323 - 1395870 | 59924.0 |
| por secretion system c-terminal sorting domain-containing protein | SAMN06297358_1132 | Not Available | Negative | 1395879 - 1397306 | 51400.9 |
| hypothetical protein | SAMN06297358_1133 | Not Available | Negative | 1397317 - 1398234 | 31913.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

