Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor, sigma-70 family | SAMN06297358_1114 | Not Available | Negative | 1376108 - 1376674 | 21912.3 |
| hypothetical protein | SAMN06297358_1115 | Not Available | Positive | 1377166 - 1377363 | 6814.0 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN06297358_1116 | Not Available | Negative | 1377432 - 1378460 | 38563.5 |
| pas domain s-box-containing protein | SAMN06297358_1117 | Not Available | Negative | 1378468 - 1379661 | 45013.0 |
| hypothetical protein | SAMN06297358_1118 | Not Available | Negative | 1379725 - 1381488 | 67261.8 |
| hypothetical protein | SAMN06297358_1119 | Not Available | Positive | 1381819 - 1382139 | 11788.3 |
| hypothetical protein | SAMN06297358_1120 | Not Available | Positive | 1382279 - 1382629 | 12907.7 |
| iron complex outermembrane recepter protein | SAMN06297358_1121 | Not Available | Positive | 1382818 - 1385211 | 90513.8 |
| protein of unknown function | SAMN06297358_1122 | Not Available | Positive | 1385225 - 1386130 | 33884.5 |
| hypothetical protein | SAMN06297358_1123 | Not Available | Positive | 1386180 - 1386878 | 25021.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

