Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | SAMN06297358_0098 | Not Available | Positive | 101587 - 101934 | 12612.4 |
| hypothetical protein | SAMN06297358_0099 | Not Available | Negative | 102065 - 103222 | 44758.0 |
| hypothetical protein | SAMN06297358_0100 | Not Available | Negative | 103266 - 103460 | 7451.04 |
| two component regulator propeller | SAMN06297358_0101 | Not Available | Negative | 103887 - 106823 | 111958.0 |
| two component transcriptional regulator, lyttr family | SAMN06297358_0102 | Not Available | Negative | 106813 - 107595 | 29488.2 |
| ferritin-like domain-containing protein | SAMN06297358_0103 | Not Available | Positive | 107726 - 108445 | 25467.0 |
| ferritin-like domain-containing protein | SAMN06297358_0104 | Not Available | Positive | 108464 - 109342 | 31289.6 |
| hypothetical protein | SAMN06297358_0105 | Not Available | Negative | 109437 - 109940 | 18964.0 |
| de-hypoxanthine futalosine cyclase | SAMN06297358_0106 | Not Available | Negative | 109972 - 111144 | 43990.8 |
| predicted zn-dependent peptidase | SAMN06297358_0107 | Not Available | Positive | 111494 - 112732 | 46791.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

