Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, laci family | SAMN06297358_1094 | Not Available | Positive | 1354311 - 1355330 | 37386.8 |
| pp_01063 | SAMN06297358_1095 | Not Available | Positive | 1355496 - 1356587 | Not Available |
| bacteriocin-protection, ydei or ompd-associated | SAMN06297358_1096 | Not Available | Negative | 1356620 - 1357129 | 19264.4 |
| tigr02757 family protein | SAMN06297358_1097 | Not Available | Negative | 1357200 - 1358060 | 33317.8 |
| cystathionine gamma-lyase/cystathionine beta-lyase | SAMN06297358_1098 | Not Available | Negative | 1358087 - 1359229 | 42185.4 |
| hypothetical protein | SAMN06297358_1099 | Not Available | Negative | 1359382 - 1360083 | 26620.6 |
| prolyl-trna synthetase | SAMN06297358_1100 | Not Available | Negative | 1360190 - 1361662 | 55798.3 |
| hypothetical protein | SAMN06297358_1101 | Not Available | Positive | 1361769 - 1362686 | 33390.4 |
| long-chain fatty acid transport protein | SAMN06297358_1102 | Not Available | Positive | 1362715 - 1364097 | 50264.3 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | SAMN06297358_1103 | Not Available | Negative | 1364175 - 1366001 | 67767.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

