Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_1084 | Not Available | Positive | 1347099 - 1347248 | 5230.23 |
| hypothetical protein | SAMN06297358_1085 | Not Available | Negative | 1347356 - 1347667 | 11673.9 |
| hypothetical protein | SAMN06297358_1086 | Not Available | Negative | 1347840 - 1348019 | 6543.82 |
| hypothetical protein | SAMN06297358_1087 | Not Available | Negative | 1348144 - 1348584 | 16802.0 |
| phosphoribosyl 1,2-cyclic phosphodiesterase | SAMN06297358_1088 | Not Available | Positive | 1348646 - 1349440 | 29739.7 |
| muramoyltetrapeptide carboxypeptidase | SAMN06297358_1089 | Not Available | Negative | 1349418 - 1350449 | 38395.2 |
| general stress protein 26 | SAMN06297358_1090 | Not Available | Negative | 1350604 - 1351164 | 21104.8 |
| hypothetical protein | SAMN06297358_1091 | Not Available | Negative | 1351177 - 1351614 | 15446.0 |
| spoiiaa-like | SAMN06297358_1092 | Not Available | Negative | 1351618 - 1351986 | 13625.4 |
| dna topoisomerase-3 | SAMN06297358_1093 | Not Available | Negative | 1352271 - 1354124 | 68845.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

