Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_1073 | Not Available | Positive | 1339827 - 1340363 | 20477.4 |
| hypothetical protein | SAMN06297358_1074 | Not Available | Negative | 1340471 - 1340602 | 4839.86 |
| hypothetical protein | SAMN06297358_1075 | Not Available | Positive | 1340592 - 1340933 | 13148.9 |
| hypothetical protein | SAMN06297358_1076 | Not Available | Positive | 1341274 - 1342107 | 30584.1 |
| cytochrome c peroxidase | SAMN06297358_1077 | Not Available | Positive | 1342109 - 1343155 | 39722.6 |
| hypothetical protein | SAMN06297358_1078 | Not Available | Positive | 1343155 - 1344078 | 34170.8 |
| hypothetical protein | SAMN06297358_1079 | Not Available | Positive | 1344089 - 1344487 | 15376.6 |
| yhs domain-containing protein | SAMN06297358_1080 | Not Available | Positive | 1344691 - 1344936 | 9167.22 |
| protein sco1/2 | SAMN06297358_1081 | Not Available | Positive | 1345022 - 1345666 | 24526.4 |
| cytochrome c, mono- and diheme variants | SAMN06297358_1082 | Not Available | Positive | 1345671 - 1346129 | 17016.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

