Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin | SAMN06297358_1053 | Not Available | Negative | 1317384 - 1317680 | 10718.2 |
| lsu ribosomal protein l20p | SAMN06297358_1054 | Not Available | Negative | 1317995 - 1318339 | 12987.0 |
| large subunit ribosomal protein l35 | SAMN06297358_1055 | Not Available | Negative | 1318413 - 1318613 | 7404.29 |
| translation initiation factor if-3 | SAMN06297358_1056 | Not Available | Negative | 1318637 - 1319206 | 21572.4 |
| ser-trna(thr) hydrolase /threonyl-trna synthetase | SAMN06297358_1057 | Not Available | Negative | 1319220 - 1321145 | 73187.4 |
| gxxexxy protein | SAMN06297358_1058 | Not Available | Positive | 1321394 - 1321771 | 14246.4 |
| hypothetical protein | SAMN06297358_1059 | Not Available | Negative | 1321924 - 1322805 | 32073.3 |
| l-lactate dehydrogenase complex protein llde | SAMN06297358_1060 | Not Available | Negative | 1322977 - 1323714 | 27447.8 |
| mfs transporter, umf1 family | SAMN06297358_1061 | Not Available | Negative | 1323748 - 1325187 | 53960.5 |
| hypothetical protein | SAMN06297358_1062 | Not Available | Negative | 1325168 - 1325404 | 9103.65 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

