Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxybutyryl-coa dehydrogenase | SAMN06297358_1033 | Not Available | Positive | 1294106 - 1294993 | 31792.0 |
| holliday junction dna helicase subunit ruvb | SAMN06297358_1034 | Not Available | Positive | 1295078 - 1296100 | 37475.1 |
| predicted amidohydrolase | SAMN06297358_1035 | Not Available | Positive | 1296384 - 1297889 | 57662.1 |
| hypothetical protein | SAMN06297358_1036 | Not Available | Negative | 1297952 - 1298173 | 8262.76 |
| epoxyqueuosine reductase | SAMN06297358_1037 | Not Available | Positive | 1298276 - 1299220 | 36089.1 |
| hypothetical protein | SAMN06297358_1038 | Not Available | Positive | 1299217 - 1300050 | 31309.3 |
| dna-3-methyladenine glycosylase | SAMN06297358_1039 | Not Available | Negative | 1300312 - 1300914 | 22179.8 |
| gaf domain-containing protein | SAMN06297358_1040 | Not Available | Negative | 1300907 - 1301383 | 17601.1 |
| peptidase s46 | SAMN06297358_1041 | Not Available | Positive | 1301550 - 1303718 | 81297.1 |
| hypothetical protein | SAMN06297358_1042 | Not Available | Positive | 1303831 - 1304079 | 9664.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

