Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_1023 | Not Available | Positive | 1282530 - 1283279 | 27746.4 |
| dna polymerase-4 | SAMN06297358_1024 | Not Available | Positive | 1283338 - 1284432 | 41023.5 |
| hypothetical protein | SAMN06297358_1025 | Not Available | Positive | 1284735 - 1284893 | 6050.51 |
| cytochrome c peroxidase | SAMN06297358_1026 | Not Available | Negative | 1284896 - 1286035 | 42632.4 |
| multidrug resistance protein, mate family | SAMN06297358_1027 | Not Available | Negative | 1286065 - 1287453 | 50321.1 |
| putative dna-binding domain-containing protein | SAMN06297358_1028 | Not Available | Negative | 1287549 - 1288175 | 23620.8 |
| protein of unknown function | SAMN06297358_1029 | Not Available | Negative | 1288239 - 1288724 | 18730.9 |
| dna gyrase subunit a | SAMN06297358_1030 | Not Available | Positive | 1289019 - 1291556 | 94854.8 |
| tetratricopeptide repeat-containing protein | SAMN06297358_1031 | Not Available | Positive | 1291665 - 1292747 | 39714.6 |
| hypothetical protein | SAMN06297358_1032 | Not Available | Positive | 1292841 - 1293977 | 43244.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

