Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN06297358_1013 | Not Available | Negative | 1271764 - 1273740 | 75419.6 |
| dna polymerase-3 subunit epsilon | SAMN06297358_1014 | Not Available | Positive | 1273939 - 1274883 | 35894.0 |
| kynureninase | SAMN06297358_1015 | Not Available | Positive | 1274980 - 1276263 | 48300.9 |
| putative membrane protein | SAMN06297358_1016 | Not Available | Positive | 1276267 - 1277127 | 32810.1 |
| acetoin utilization deacetylase acuc | SAMN06297358_1017 | Not Available | Positive | 1277194 - 1278096 | 34040.6 |
| putative membrane protein | SAMN06297358_1018 | Not Available | Negative | 1278189 - 1279196 | 39078.1 |
| sodium/proton antiporter, cpa1 family | SAMN06297358_1019 | Not Available | Negative | 1279206 - 1280810 | 59414.9 |
| doxx-like family protein | SAMN06297358_1020 | Not Available | Negative | 1280810 - 1281160 | 13017.0 |
| hypothetical protein | SAMN06297358_1021 | Not Available | Positive | 1281249 - 1281791 | 20603.7 |
| trna pseudouridine65 synthase | SAMN06297358_1022 | Not Available | Positive | 1281808 - 1282491 | 26418.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

