Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cbs domain-containing protein | SAMN06297358_1003 | Not Available | Negative | 1262153 - 1262575 | 15802.3 |
| response regulator receiver domain-containing protein | SAMN06297358_1004 | Not Available | Negative | 1262761 - 1263138 | 14442.5 |
| hypothetical protein | SAMN06297358_1005 | Not Available | Negative | 1263314 - 1263811 | 18386.7 |
| 2'-5' rna ligase | SAMN06297358_1006 | Not Available | Positive | 1263912 - 1264502 | 22401.0 |
| dna mismatch repair protein muts | SAMN06297358_1007 | Not Available | Positive | 1264852 - 1267461 | 98090.8 |
| lipoprotein spr/probable lipoprotein nlpc | SAMN06297358_1008 | Not Available | Positive | 1267531 - 1268028 | 18321.2 |
| ahpc/tsa family protein | SAMN06297358_1009 | Not Available | Positive | 1268028 - 1268588 | 21289.9 |
| thiol-disulfide isomerase or thioredoxin | SAMN06297358_1010 | Not Available | Positive | 1268601 - 1269077 | 18153.1 |
| ahpc/tsa family protein | SAMN06297358_1011 | Not Available | Positive | 1269176 - 1269790 | 22453.9 |
| transglutaminase-like superfamily protein | SAMN06297358_1012 | Not Available | Negative | 1269857 - 1271764 | 72556.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

