Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_0088 | Not Available | Positive | 91442 - 91726 | 10775.9 |
| sodium/proton antiporter, cpa1 family | SAMN06297358_0089 | Not Available | Negative | 91847 - 93094 | 45156.8 |
| tetratricopeptide repeat-containing protein | SAMN06297358_0090 | Not Available | Positive | 93324 - 95084 | 66987.4 |
| two component transcriptional regulator, luxr family | SAMN06297358_0091 | Not Available | Positive | 95091 - 95738 | 23864.3 |
| hypothetical protein | SAMN06297358_0092 | Not Available | Positive | 95829 - 96455 | 22909.7 |
| large subunit ribosomal protein l31 | SAMN06297358_0093 | Not Available | Positive | 96662 - 96910 | 9777.7 |
| udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase | SAMN06297358_0094 | Not Available | Positive | 96982 - 98151 | 43418.5 |
| triosephosphate isomerase | SAMN06297358_0095 | Not Available | Positive | 98222 - 98983 | 27377.3 |
| ribosomal protein l11 methyltransferase | SAMN06297358_0096 | Not Available | Positive | 99307 - 100140 | 31608.2 |
| udp-n-acetylmuramate: l-alanyl-gamma-d-glutamyl-meso-diaminopimelate ligase | SAMN06297358_0097 | Not Available | Positive | 100224 - 101579 | 50153.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

