Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | + | 45 - 156 | 18.01 |
| 23s ribosomal rna . bacterial lsu | Not Available | Not Available | + | 243 - 3119 | 18.01 |
| acyl-[acyl-carrier-protein] desaturase | SAMN06297358_0001 | Not Available | + | 379 - 1359 | 37918.5 |
| 16s ribosomal rna . bacterial ssu | Not Available | Not Available | + | 3734 - 5257 | 18.01 |
| methylmalonyl-coa mutase | SAMN06297358_0002 | Not Available | - | 1403 - 4768 | 126259.0 |
| type i phosphodiesterase / nucleotide pyrophosphatase | SAMN06297358_0003 | Not Available | - | 4986 - 6653 | 61982.9 |
| dihydrofolate synthase / folylpolyglutamate synthase | SAMN06297358_0004 | Not Available | - | 6763 - 8049 | 47461.5 |
| protein of unknown function | SAMN06297358_0005 | Not Available | + | 8164 - 8820 | 24990.1 |
| hypothetical protein | SAMN06297358_0006 | Not Available | - | 8861 - 9676 | 28797.6 |
| biopolymer transport protein exbd | SAMN06297358_0007 | Not Available | - | 9679 - 10080 | 14945.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.