Sphingobium indicum F2

Gram-negativeRodNon-motileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Sphingobium indicum F2 is a Gram-negative, rod-shaped bacterium that thrives in terrestrial habitats and exhibits aerobic metabolism. This organism optimally grows at a temperature of 28.0°C, indicating a preference for moderate environmental conditions. As a member of the Sphingobium genus, it is likely to play a role in the degradation of complex organic compounds in its terrestrial ecosystem. The aerobic nature of Sphingobium indicum F2 suggests that it relies on oxygen for its metabolic processes, which may influence its ecological niche, particularly in environments where oxygen is readily available. Its ability to inhabit terrestrial ecosystems positions it as a potential participant in soil microbiomes, where microbial interactions are critical for nutrient cycling and organic matter decomposition. Understanding the traits of Sphingobium indicum F2 not only adds to the knowledge of its biological characteristics but also hints at its potential contributions to soil health and bioremediation efforts. Its metabolic capabilities may allow it to assist in breaking down pollutants or organic materials, thus serving an important function in maintaining ecological balance in its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium indicum
StrainF2

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Sphingobium indicum F2
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperature28
Temperature rangeMesophilic
HabitatTerrestrial
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium indicum F2


Gene Summary

Adenine Count

790725 bp

Thymine Count

793264 bp

Guanine Count

1421722 bp

Cytosine Count

1437046 bp

Genome Length

4442759 bp

Protein-coding Genes

4079 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Putative portal proteinAL00_06315Not Available+1226272 - 122843780253.7
Hypothetical proteinAL00_06320Not Available+1228527 - 122936330467.3
Putative capsid proteinAL00_06325Not Available+1229418 - 123068044769.6
hypothetical proteinAL00_06330Not Available+1230743 - 123117115882.8
hypothetical proteinAL00_06335Not Available+1231189 - 12314198541.86
Hypothetical proteinAL00_06340Not Available+1231574 - 12318769995.83
Putative head dna stabilization proteinAL00_06345Not Available+1231890 - 123264526528.2
Head completion proteinAL00_06350Not Available+1232642 - 123403950149.1
hypothetical proteinAL00_06355Not Available+1234039 - 123524140378.0
Dna injection proteinAL00_06360Not Available+1235313 - 123613727705.3

Displaying genes 1 – 10 of 4161 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites