Escherichia coli O174:H8 str. 04-3038

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli O174:H8 str. 04-3038 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism, allowing it to thrive in both aerobic and anaerobic environments. This strain is characterized by its mobility, attributed to the presence of flagella, and typically exists in pairs or singles. It is classified as mesophilic, with an optimal growth temperature of 37°C, which aligns with the typical human body temperature, suggesting a potential association with host organisms. The bacterium has a free-living biotic relationship, indicating that it can survive independently in various environments, although it is also host-associated. With a single replicon and a double membrane structure, E. coli O174:H8 str. 04-3038 shares fundamental characteristics common to many E. coli strains. The habitat of this strain, being host-associated, points to its potential role in the microbiota of various organisms, including humans. The ability to adapt to different oxygen levels and the optimal growth temperature suggest that it may play a significant role in the gastrointestinal tract, contributing to the complex dynamics of microbial communities. Understanding the traits of E. coli O174:H8 str. 04-3038 can provide insights into its ecological functions and interactions within host-associated environments. The accession number JHOC00000000.1 serves as a reference for further genomic studies related to this strain.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainO174:H8 04-3038

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli O174:H8 str. 04-3038
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli O174:H8 str. 04-3038


Gene Summary

Adenine Count

1389626 bp

Thymine Count

1400631 bp

Guanine Count

1423345 bp

Cytosine Count

1419106 bp

Genome Length

5632708 bp

Protein-coding Genes

4787 genes

Non-Coding Genes

659 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Tail tape measure proteinBW70_00005Not AvailableNegative1 - 273696970.6
rrna,type:5sNot AvailableNot AvailablePositive151 - 26618.01
Trna-met;Not AvailableNot AvailablePositive285 - 360Not Available
Trna-asp;Not AvailableNot AvailablePositive349 - 425Not Available
Trna-arg;Not AvailableNot AvailablePositive370 - 446Not Available
Trna-trp;Not AvailableNot AvailablePositive434 - 509Not Available
Trna-asp;Not AvailableNot AvailablePositive460 - 536Not Available
Trna-pro;Not AvailableNot AvailablePositive398 - 474Not Available
Trna-gly;Not AvailableNot AvailablePositive1023 - 1096Not Available
Trna-ser;Not AvailableNot AvailablePositive1174 - 1261Not Available

Displaying genes 1 – 10 of 5446 in total

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

No health effects information available for this bacterium.