Rhodococcus pyridinivorans SB3094

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus pyridinivorans SB3094 is a notable bacterial species characterized by the presence of flagella, which contributes to its motility. This species possesses three replicons, indicating a complex genomic organization that may play a role in its adaptability and metabolic capabilities. The genetic information of R. pyridinivorans SB3094 is documented in multiple accession numbers, specifically NC_023144.1, NC_023145.1, and NC_023150.1. These accession numbers correspond to the genomic sequences available in public databases, which can facilitate further research into the organism's genetics and functions. Rhodococcus species, including R. pyridinivorans, are well-known for their ability to degrade a variety of organic compounds, including pollutants. This trait allows them to play a significant role in bioremediation processes, where they can help to clean up contaminated environments. The presence of flagella may enhance their ability to navigate toward pollutants, thereby improving their effectiveness in such ecological roles. In summary, R. pyridinivorans SB3094 is equipped with flagella and possesses a complex genomic structure with three replicons, which may underpin its ecological significance in bioremediation efforts. The understanding of its genetic makeup and motility can provide insights into its potential applications in environmental microbiology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus pyridinivorans
StrainSB3094

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus pyridinivorans SB3094 plasmid unnamed, complete

Gene Summary

Adenine Count

64015 bp

Thymine Count

62308 bp

Guanine Count

115898 bp

Cytosine Count

119176 bp

Genome Length

361397 bp

Protein-coding Genes

350 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dutp diphosphataseY013_RS01840Not AvailablePositive390716 - 39118616120.4
duf3710 domain-containing proteinY013_RS01845Not AvailablePositive391188 - 39208431698.8
alpha/beta fold hydrolaseY013_RS01850Not AvailableNegative392097 - 39282825433.1
ob-fold nucleic acid binding domain-containing proteinY013_RS01855Not AvailablePositive393012 - 39338613903.6
duf3159 domain-containing proteinY013_RS01860Not AvailablePositive393463 - 39420326915.6
trka family potassium uptake proteinY013_RS01865Not AvailableNegative394200 - 39485323520.2
trka family potassium uptake proteinY013_RS01870Not AvailableNegative394879 - 39554423705.9
apc family permeaseY013_RS01875Not AvailablePositive395686 - 39768371859.9
class i sam-dependent rna methyltransferaseY013_RS01880Not AvailablePositive397680 - 39896345810.2
marr family winged helix-turn-helix transcriptional regulatorY013_RS01885Not AvailablePositive399116 - 39957416864.3

Displaying genes 721 – 730 of 5222 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.