Methanosarcina sp. Kolksee

Cocci

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Methanomicrobia

Order

Methanosarcinales

Family

Methanosarcinaceae

Genus

Methanosarcina

Description

Methanosarcina sp. Kolksee is a coccoid bacterium notable for its unique characteristics within the domain of methanogenic Archaea. This organism exhibits the presence of flagella, which may contribute to its motility in various environments. Methanosarcina species are known for their versatility in utilizing different substrates for methanogenesis, a critical aspect of their ecological role in anaerobic environments. Genetically, Methanosarcina sp. Kolksee has two replicons, indicating a complex genome organization that may facilitate diverse metabolic pathways. The specific genetic information about this strain can be accessed through the nucleotide sequences NZ_CP009523.1 and NZ_CP009524.1. These sequences are essential for understanding the genetic basis of its methanogenic capabilities and potential adaptations to environmental conditions. In terms of its ecological role, Methanosarcina sp. Kolksee is likely to contribute significantly to the carbon cycle, particularly in anaerobic ecosystems such as wetlands or sediments where organic matter is decomposed. By producing methane, this species plays a crucial role in the greenhouse gas dynamics and energy flow within these ecosystems. Overall, the combination of its coccoid shape, flagella presence, and genetic traits positions Methanosarcina sp. Kolksee as a significant player in methane production and carbon cycling in anaerobic environments.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassMethanomicrobia
OrderMethanosarcinales
FamilyMethanosarcinaceae
GenusMethanosarcina
SpeciesMethanosarcina sp. Kolksee
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methanosarcina sp. Kolksee plasmid unnamed, complete sequence.

Gene Summary

Adenine Count

18092 bp

Thymine Count

17628 bp

Guanine Count

9539 bp

Cytosine Count

9122 bp

Genome Length

54381 bp

Protein-coding Genes

36 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
stress response translation initiation inhibitor ycihMSKOL_RS15450Not AvailablePositive3757211 - 375751911352.8
transcriptional regulatorMSKOL_RS15455Not AvailablePositive3757784 - 375814913639.4
nre family dna repair proteinMSKOL_RS15460Not AvailablePositive3758146 - 375937245606.9
phosphoribosylaminoimidazolesuccinocarboxamide synthaseMSKOL_RS15465Not AvailableNegative3759533 - 376024627131.9
atp-binding proteinMSKOL_RS15470Not AvailablePositive3760732 - 376201248917.0
mbl fold metallo-hydrolaseMSKOL_RS15475Not AvailablePositive3762014 - 376275427950.9
deoxyribodipyrimidine photo-lyaseMSKOL_RS15480Not AvailablePositive3762913 - 376430153656.0
hypothetical proteinMSKOL_RS15485Not AvailablePositive3764598 - 376492412626.5
duf378 domain-containing proteinMSKOL_RS15490Not AvailablePositive3765151 - 37653848477.47
hypothetical proteinMSKOL_RS21180Not AvailableNegative3765545 - 37657367330.29

Displaying genes 3191 – 3200 of 3831 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.