Methanosarcina sp. Kolksee

Cocci

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Methanomicrobia

Order

Methanosarcinales

Family

Methanosarcinaceae

Genus

Methanosarcina

Description

Methanosarcina sp. Kolksee is a coccoid bacterium notable for its unique characteristics within the domain of methanogenic Archaea. This organism exhibits the presence of flagella, which may contribute to its motility in various environments. Methanosarcina species are known for their versatility in utilizing different substrates for methanogenesis, a critical aspect of their ecological role in anaerobic environments. Genetically, Methanosarcina sp. Kolksee has two replicons, indicating a complex genome organization that may facilitate diverse metabolic pathways. The specific genetic information about this strain can be accessed through the nucleotide sequences NZ_CP009523.1 and NZ_CP009524.1. These sequences are essential for understanding the genetic basis of its methanogenic capabilities and potential adaptations to environmental conditions. In terms of its ecological role, Methanosarcina sp. Kolksee is likely to contribute significantly to the carbon cycle, particularly in anaerobic ecosystems such as wetlands or sediments where organic matter is decomposed. By producing methane, this species plays a crucial role in the greenhouse gas dynamics and energy flow within these ecosystems. Overall, the combination of its coccoid shape, flagella presence, and genetic traits positions Methanosarcina sp. Kolksee as a significant player in methane production and carbon cycling in anaerobic environments.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassMethanomicrobia
OrderMethanosarcinales
FamilyMethanosarcinaceae
GenusMethanosarcina
SpeciesMethanosarcina sp. Kolksee
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methanosarcina sp. Kolksee chromosome, complete genome.

Gene Summary

Adenine Count

1338335 bp

Thymine Count

1365040 bp

Guanine Count

893104 bp

Cytosine Count

902635 bp

Genome Length

4499114 bp

Protein-coding Genes

3725 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cdc6/cdc18 family proteinMSKOL_RS00005Not AvailablePositive1872 - 316148558.5
duf1699 family proteinMSKOL_RS00010Not AvailablePositive5015 - 542215744.1
site-specific integraseMSKOL_RS00015Not AvailableNegative5561 - 620825515.9
glycoside hydrolase family 18 proteinMSKOL_RS00025Not AvailableNegative6569 - 760940095.9
acyltransferaseMSKOL_RS00030Not AvailableNegative7781 - 848225624.0
hypothetical proteinMSKOL_RS00035Not AvailablePositive9652 - 98466862.93
cpbp family intramembrane glutamic endopeptidaseMSKOL_RS00040Not AvailableNegative10039 - 1091132801.3
metal-dependent hydrolaseMSKOL_RS00045Not AvailableNegative11014 - 1159221710.0
polysaccharide deacetylase family proteinMSKOL_RS00050Not AvailablePositive12822 - 1367632860.8
acyltransferaseMSKOL_RS00055Not AvailablePositive14510 - 1503119107.5

Displaying genes 1 – 10 of 3831 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.