Rhodococcus sp. BUPNP1

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus sp. BUPNP1 is a notable bacterium characterized by the presence of flagella, which indicates it has the capability for motility. This trait is significant as motility can enhance the bacterium's ability to explore its environment and interact with other microorganisms. The organism possesses a single replicon, suggesting a streamlined genomic organization, which may influence its replication and genetic stability. The genomic information for Rhodococcus sp. BUPNP1 is cataloged under the accession number NERM00000000.1, providing a reference point for further studies and comparisons within the genus Rhodococcus. This genus is known for its metabolic versatility, which allows many of its members to degrade a variety of environmental pollutants, thus playing a role in bioremediation processes. In ecological terms, the motility of Rhodococcus sp. BUPNP1 could be advantageous in nutrient-rich environments or contaminated sites where it might seek out and degrade harmful substances. The ability to move toward beneficial resources or away from adverse conditions can contribute to its survival and ecological fitness. Overall, Rhodococcus sp. BUPNP1 exemplifies how specific traits like flagella presence can influence the ecological roles of microorganisms in their environments, particularly in bioremediation contexts.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus sp. BUPNP1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus sp. BUPNP1 NODE_89, whole genome shotgun sequence.

Gene Summary

Adenine Count

885857 bp

Thymine Count

886566 bp

Guanine Count

1889410 bp

Cytosine Count

1893279 bp

Genome Length

5555112 bp

Protein-coding Genes

4963 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
antibiotic biosynthesis monooxygenaseB9C99_22610Not AvailablePositive4926597 - 492690810636.6
3-hydroxybutyryl-coa dehydrogenaseB9C99_22620Not AvailableNegative4928235 - 492909230401.9
tetr family transcriptional regulatorB9C99_22625Not AvailableNegative4929106 - 492973822747.2
sam-dependent methyltransferaseB9C99_22630Not AvailablePositive4930121 - 493097231111.3
hypothetical proteinB9C99_22635Not AvailableNegative4930994 - 493147616172.8
proteasome atpaseB9C99_22640Not AvailablePositive4931664 - 493343365203.3
nitroreductase family deazaflavin-dependent oxidoreductaseB9C99_22645Not AvailablePositive4933512 - 493389814062.1
proteasome accessory factor pafa2B9C99_22650Not AvailablePositive4933954 - 493544754908.1
ubiquitin-like protein pupB9C99_22655Not AvailablePositive4935614 - 49358056772.46
proteasome subunit betaB9C99_22660Not AvailablePositive4935802 - 493665630246.7

Displaying genes 4481 – 4490 of 5028 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.