Rhodococcus sp. BUPNP1

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus sp. BUPNP1 is a notable bacterium characterized by the presence of flagella, which indicates it has the capability for motility. This trait is significant as motility can enhance the bacterium's ability to explore its environment and interact with other microorganisms. The organism possesses a single replicon, suggesting a streamlined genomic organization, which may influence its replication and genetic stability. The genomic information for Rhodococcus sp. BUPNP1 is cataloged under the accession number NERM00000000.1, providing a reference point for further studies and comparisons within the genus Rhodococcus. This genus is known for its metabolic versatility, which allows many of its members to degrade a variety of environmental pollutants, thus playing a role in bioremediation processes. In ecological terms, the motility of Rhodococcus sp. BUPNP1 could be advantageous in nutrient-rich environments or contaminated sites where it might seek out and degrade harmful substances. The ability to move toward beneficial resources or away from adverse conditions can contribute to its survival and ecological fitness. Overall, Rhodococcus sp. BUPNP1 exemplifies how specific traits like flagella presence can influence the ecological roles of microorganisms in their environments, particularly in bioremediation contexts.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus sp. BUPNP1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus sp. BUPNP1 NODE_89, whole genome shotgun sequence.

Gene Summary

Adenine Count

885857 bp

Thymine Count

886566 bp

Guanine Count

1889410 bp

Cytosine Count

1893279 bp

Genome Length

5555112 bp

Protein-coding Genes

4963 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nucleotide exchange factor grpeB9C99_18345Not AvailablePositive4006345 - 400698923179.6
molecular chaperone dnajB9C99_18350Not AvailablePositive4007022 - 400819440719.8
merr family transcriptional regulatorB9C99_18355Not AvailablePositive4008194 - 400859815144.2
3-ketosteroid-delta-1-dehydrogenaseB9C99_18360Not AvailablePositive4008742 - 401027754403.9
hypothetical proteinB9C99_18365Not AvailableNegative4010358 - 401081015496.0
alkane 1-monooxygenaseB9C99_18370Not AvailableNegative4010907 - 401189635686.7
monooxygenaseB9C99_18375Not AvailableNegative4012011 - 401250517627.9
steroid delta-isomeraseB9C99_18380Not AvailableNegative4012584 - 401297314024.5
llm class f420-dependent oxidoreductaseB9C99_18385Not AvailableNegative4013021 - 401396533992.5
fad-binding dehydrogenaseB9C99_18390Not AvailableNegative4014050 - 401551651854.8

Displaying genes 3641 – 3650 of 5028 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.