Rhodococcus sp. BUPNP1

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus sp. BUPNP1 is a notable bacterium characterized by the presence of flagella, which indicates it has the capability for motility. This trait is significant as motility can enhance the bacterium's ability to explore its environment and interact with other microorganisms. The organism possesses a single replicon, suggesting a streamlined genomic organization, which may influence its replication and genetic stability. The genomic information for Rhodococcus sp. BUPNP1 is cataloged under the accession number NERM00000000.1, providing a reference point for further studies and comparisons within the genus Rhodococcus. This genus is known for its metabolic versatility, which allows many of its members to degrade a variety of environmental pollutants, thus playing a role in bioremediation processes. In ecological terms, the motility of Rhodococcus sp. BUPNP1 could be advantageous in nutrient-rich environments or contaminated sites where it might seek out and degrade harmful substances. The ability to move toward beneficial resources or away from adverse conditions can contribute to its survival and ecological fitness. Overall, Rhodococcus sp. BUPNP1 exemplifies how specific traits like flagella presence can influence the ecological roles of microorganisms in their environments, particularly in bioremediation contexts.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus sp. BUPNP1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus sp. BUPNP1 NODE_89, whole genome shotgun sequence.

Gene Summary

Adenine Count

885857 bp

Thymine Count

886566 bp

Guanine Count

1889410 bp

Cytosine Count

1893279 bp

Genome Length

5555112 bp

Protein-coding Genes

4963 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amino acid dehydrogenaseB9C99_16865Not AvailableNegative3682644 - 368389745344.7
asnc family transcriptional regulatorB9C99_16870Not AvailableNegative3684039 - 368454818518.5
4-hydroxyphenylpyruvate dioxygenaseB9C99_16875Not AvailablePositive3684735 - 368594045235.3
polyketide cyclaseB9C99_16880Not AvailableNegative3685949 - 368638916177.4
alcohol dehydrogenaseB9C99_16885Not AvailablePositive3686540 - 368766739124.3
tetr family transcriptional regulatorB9C99_16890Not AvailablePositive3687734 - 368836022908.9
acyl-coa dehydrogenaseB9C99_16895Not AvailablePositive3688454 - 368966542908.0
acyl-coa dehydrogenaseB9C99_16900Not AvailablePositive3689662 - 369069036885.8
short-chain dehydrogenaseB9C99_16905Not AvailablePositive3690687 - 369142125175.2
cytochrome p450B9C99_16910Not AvailableNegative3691426 - 369280551848.0

Displaying genes 3351 – 3360 of 5028 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.