Rhodococcus sp. BUPNP1

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus sp. BUPNP1 is a notable bacterium characterized by the presence of flagella, which indicates it has the capability for motility. This trait is significant as motility can enhance the bacterium's ability to explore its environment and interact with other microorganisms. The organism possesses a single replicon, suggesting a streamlined genomic organization, which may influence its replication and genetic stability. The genomic information for Rhodococcus sp. BUPNP1 is cataloged under the accession number NERM00000000.1, providing a reference point for further studies and comparisons within the genus Rhodococcus. This genus is known for its metabolic versatility, which allows many of its members to degrade a variety of environmental pollutants, thus playing a role in bioremediation processes. In ecological terms, the motility of Rhodococcus sp. BUPNP1 could be advantageous in nutrient-rich environments or contaminated sites where it might seek out and degrade harmful substances. The ability to move toward beneficial resources or away from adverse conditions can contribute to its survival and ecological fitness. Overall, Rhodococcus sp. BUPNP1 exemplifies how specific traits like flagella presence can influence the ecological roles of microorganisms in their environments, particularly in bioremediation contexts.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus sp. BUPNP1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus sp. BUPNP1 NODE_89, whole genome shotgun sequence.

Gene Summary

Adenine Count

885857 bp

Thymine Count

886566 bp

Guanine Count

1889410 bp

Cytosine Count

1893279 bp

Genome Length

5555112 bp

Protein-coding Genes

4963 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinB9C99_00880Not AvailablePositive203857 - 2040547166.82
7,8-didemethyl-8-hydroxy-5-deazariboflavin synthaseB9C99_00885Not AvailablePositive204100 - 20669793789.3
ferredoxinB9C99_00890Not AvailablePositive206852 - 20717511818.8
succinyldiaminopimelate transaminaseB9C99_00895Not AvailablePositive207222 - 20831038562.1
rhomboid family intramembrane serine proteaseB9C99_00900Not AvailablePositive208498 - 20920224427.2
acyl-coa synthetaseB9C99_00905Not AvailablePositive209247 - 21067750692.8
transcriptional regulatorB9C99_00910Not AvailablePositive210849 - 21210245758.9
hypothetical proteinB9C99_00915Not AvailablePositive212202 - 21387257872.5
amino acid transporterB9C99_00920Not AvailableNegative213841 - 21525050342.7
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferaseB9C99_00925Not AvailableNegative215287 - 21624032722.9

Displaying genes 181 – 190 of 5028 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.