Rhodococcus sp. BUPNP1

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus sp. BUPNP1 is a notable bacterium characterized by the presence of flagella, which indicates it has the capability for motility. This trait is significant as motility can enhance the bacterium's ability to explore its environment and interact with other microorganisms. The organism possesses a single replicon, suggesting a streamlined genomic organization, which may influence its replication and genetic stability. The genomic information for Rhodococcus sp. BUPNP1 is cataloged under the accession number NERM00000000.1, providing a reference point for further studies and comparisons within the genus Rhodococcus. This genus is known for its metabolic versatility, which allows many of its members to degrade a variety of environmental pollutants, thus playing a role in bioremediation processes. In ecological terms, the motility of Rhodococcus sp. BUPNP1 could be advantageous in nutrient-rich environments or contaminated sites where it might seek out and degrade harmful substances. The ability to move toward beneficial resources or away from adverse conditions can contribute to its survival and ecological fitness. Overall, Rhodococcus sp. BUPNP1 exemplifies how specific traits like flagella presence can influence the ecological roles of microorganisms in their environments, particularly in bioremediation contexts.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus sp. BUPNP1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus sp. BUPNP1 NODE_89, whole genome shotgun sequence.

Gene Summary

Adenine Count

885857 bp

Thymine Count

886566 bp

Guanine Count

1889410 bp

Cytosine Count

1893279 bp

Genome Length

5555112 bp

Protein-coding Genes

4963 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
translation initiation factor if-1B9C99_09045Not AvailablePositive2021061 - 202142613555.4
50s ribosomal protein l36B9C99_09050Not AvailablePositive2021519 - 20216324394.66
30s ribosomal protein s13B9C99_09055Not AvailablePositive2021842 - 202221014081.1
30s ribosomal protein s11B9C99_09060Not AvailablePositive2022210 - 202262314681.5
30s ribosomal protein s4B9C99_09065Not AvailablePositive2022646 - 202325123388.3
dna-directed rna polymerase subunit alphaB9C99_09070Not AvailablePositive2023353 - 202441438068.9
50s ribosomal protein l17B9C99_09075Not AvailablePositive2024445 - 202499919633.2
trna pseudouridine(38-40) synthase truaB9C99_09080Not AvailablePositive2025005 - 202590132481.4
esteraseB9C99_09085Not AvailablePositive2025937 - 202693835382.2
aminoglycoside phosphotransferaseB9C99_09090Not AvailableNegative2027191 - 202805732201.2

Displaying genes 1801 – 1810 of 5028 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.