Ligilactobacillus murinus DSM 20452 = NBRC 14221

Rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Ligilactobacillus

Description

Ligilactobacillus murinus DSM 20452 (also known as NBRC 14221) is a Gram-positive bacterium characterized by its rod-shaped morphology. This species possesses flagella, which contributes to its motility. It has a single replicon, indicating a simplified genomic structure that may influence its replication and genetic stability. The accession number for Ligilactobacillus murinus is AYYN00000000.1, which provides a reference for genomic information and facilitates further research into its genetic makeup. The presence of flagella suggests that Ligilactobacillus murinus may have adaptive advantages in its environment, such as the ability to navigate through complex microbial communities or to colonize specific niches. From a biological or ecological perspective, the motility granted by flagella can play a significant role in the survival of Ligilactobacillus murinus within various environments, including the gastrointestinal tract of hosts. Its Gram-positive nature may also indicate potential interactions with other microorganisms and host tissues, contributing to its ecological role as a member of the gut microbiota. Understanding the characteristics of Ligilactobacillus murinus can provide insights into its function within microbial ecosystems and its potential applications in probiotics or fermentation processes.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusLigilactobacillus
SpeciesLigilactobacillus murinus
StrainDSM 20452 = NBRC 14221

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ligilactobacillus murinus DSM 20452 = NBRC 14221
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ligilactobacillus murinus DSM 20452 = NBRC 14221


Gene Summary

Adenine Count

660510 bp

Thymine Count

647977 bp

Guanine Count

441057 bp

Cytosine Count

432439 bp

Genome Length

2183163 bp

Protein-coding Genes

1934 genes

Non-Coding Genes

99 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive1473010 - 1473089Not Available
IntegraseFC48_GL000934Q9CI63Negative1473159 - 147428943083.6
Abi family proteinFC48_GL000935Not AvailableNegative1474376 - 147537438827.6
hypothetical proteinFC48_GL000936Not AvailableNegative1475488 - 147588615028.0
Orf026FC48_GL000937Not AvailableNegative1476006 - 147645217621.6
Rep proteinFC48_GL000938Not AvailableNegative1476467 - 147675711077.8
Hypothetical proteinFC48_GL000939Not AvailablePositive1477044 - 14772447587.3
hypothetical proteinFC48_GL000942Not AvailablePositive1478187 - 14784449215.17
Chromosome segregation proteinFC48_GL000943Not AvailablePositive1478491 - 147973846465.0
Hypothetical proteinFC48_GL000944Not AvailablePositive1479739 - 148083941317.1

Displaying genes 1 – 10 of 2033 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

96 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000400(R)-10-hydroxyoctadecanoateC18H35O3Chemical structure of (R)-10-hydroxyoctadecanoateNot available
Average299.476Da
Monoisotopic299.2591686Da
BASm0000403(S)-acetoinC4H8O2Chemical structure of (S)-acetoinNot available
Average88.1051Da
Monoisotopic88.0524295Da
BASm0000419S-formylmycothiolC18H30N2O13SChemical structure of S-formylmycothiolNot available
Average514.5Da
Monoisotopic514.146860208Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm0001358lactateC3H5O3Chemical structure of lactateNot available
Average89.071Da
Monoisotopic89.0244176Da
BASm0001697(S)-4,5-dihydroxypentane-2,3-dioneC5H8O4Chemical structure of (S)-4,5-dihydroxypentane-2,3-dioneNot available
Average132.1146Da
Monoisotopic132.042258744Da

Displaying 1–10 of 96 metabolites

Health Effects

No health effects information available for this bacterium.