Paraburkholderia phytofirmans OLGA172

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Paraburkholderia

Description

Paraburkholderia phytofirmans OLGA172 is a gram-negative, aerobic bacterium characterized by its rod shape and mobility, facilitated by the presence of flagella. This organism thrives in terrestrial habitats and exhibits optimal growth at a temperature of 30°C, placing it within the mesophilic temperature range. The genomic structure of P. phytofirmans OLGA172 is notable for containing five replicons and two membranes, which is indicative of its complex cellular organization. Unlike some other bacteria, this strain does not undergo sporulation, allowing it to maintain a consistent form in its environment. As a free-living bacterium, P. phytofirmans OLGA172 plays a significant role in its ecosystem, likely contributing to nutrient cycling and soil health. Its aerobic nature suggests that it may be involved in processes such as organic matter decomposition, which is essential for maintaining soil fertility. The ability to thrive in terrestrial environments underscores its potential importance in agricultural contexts, where it may interact with plant roots and other soil organisms, promoting plant growth or influencing microbial communities. The study of P. phytofirmans OLGA172 reveals insights into the ecological roles of free-living bacteria in terrestrial environments, highlighting their contributions to ecosystem dynamics and potential applications in agriculture and bioremediation.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusParaburkholderia
SpeciesParaburkholderia phytofirmans
StrainOLGA172

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Paraburkholderia phytofirmans OLGA172
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatTerrestrial
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paraburkholderia phytofirmans OLGA172 chromosome 2, complete

Gene Summary

Adenine Count

697652 bp

Thymine Count

694443 bp

Guanine Count

1050335 bp

Cytosine Count

1055191 bp

Genome Length

3497621 bp

Protein-coding Genes

3117 genes

Non-Coding Genes

35 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinAYM40_RS37695Not AvailableNegative749 - 107812058.4
para family proteinAYM40_RS37700P07175Negative1075 - 175824441.1
replication initiation proteinAYM40_RS37705Not AvailablePositive3264 - 405529796.2
hypothetical proteinAYM40_RS37710Not AvailableNegative4269 - 45208783.68
hypothetical proteinAYM40_RS37720Not AvailableNegative4941 - 529713303.7
xre family transcriptional regulatorAYM40_RS37725Not AvailableNegative6104 - 639110515.7
type ii toxin-antitoxin system rele/pare family toxinAYM40_RS37730Not AvailableNegative6436 - 681014158.6
hypothetical proteinAYM40_RS41720Not AvailablePositive7332 - 789820663.1
is66 family transposaseAYM40_RS37740P50360Negative7911 - 950059409.9
is66 family insertion sequence element accessory protein tnpbAYM40_RS37745P50359Negative9552 - 989912705.5

Displaying genes 1 – 10 of 7789 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

224 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002634-(hydroxymethyl)benzenesulfonateC7H7O4SChemical structure of 4-(hydroxymethyl)benzenesulfonateNot available
Average187.19Da
Monoisotopic187.007053459Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000430hercynineC9H15N3O2Chemical structure of hercynineNot available
Average197.238Da
Monoisotopic197.1164267Da

Displaying 1–10 of 224 metabolites

Health Effects

No health effects information available for this bacterium.