Clostridium tyrobutyricum DIVETGP

anaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium tyrobutyricum DIVETGP is an anaerobic bacterium, meaning it thrives in environments devoid of oxygen. This characteristic is crucial for its survival and metabolic processes, as many anaerobes rely on fermentation pathways to generate energy in the absence of oxygen. C. tyrobutyricum is notable for its capacity to produce butyric acid, which has implications for various industrial applications, including the food and feed industries. The organism possesses a single replicon, indicating a streamlined genetic structure that may facilitate efficient replication and maintenance of its genomic integrity. The genomic data for C. tyrobutyricum DIVETGP is cataloged under the accession number CBXI000000000.1, providing a reference for researchers interested in its genetic characteristics and potential biotechnological applications. In ecological terms, C. tyrobutyricum DIVETGP plays a role in anaerobic environments, such as soils and the gastrointestinal tracts of animals. Its ability to ferment carbohydrates and produce butyrate contributes to the carbon cycle and influences the microbial community structure in these habitats. Butyrate, in particular, is recognized for its beneficial effects on gut health, serving as an energy source for colonocytes and possessing anti-inflammatory properties. Thus, the study of C. tyrobutyricum DIVETGP not only enhances our understanding of anaerobic microbial ecosystems but also opens avenues for exploring its potential benefits in health and industry.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium tyrobutyricum
StrainDIVETGP

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium tyrobutyricum DIVETGP


Gene Summary

Adenine Count

1062893 bp

Thymine Count

1024841 bp

Guanine Count

486909 bp

Cytosine Count

444356 bp

Genome Length

3018999 bp

Protein-coding Genes

2954 genes

Non-Coding Genes

136 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive1520084 - 1520095Not Available
IntegraseCTDIVETGP_1515Not AvailablePositive1520098 - 15202535960.39
AttlNot AvailableNot AvailablePositive1520666 - 1520677Not Available
hypothetical proteinCTDIVETGP_1516Not AvailableNegative1520687 - 152142729641.0
hypothetical proteinCTDIVETGP_1517Not AvailableNegative1521585 - 152222024582.6
hypothetical proteinCTDIVETGP_1518Not AvailableNegative1522290 - 152336641361.0
Putative modification methylase dpniiaCTDIVETGP_1519Not AvailableNegative1523617 - 152437229883.9
quaternary ammonium compound-resistance protein sugeCTDIVETGP_1520Not AvailablePositive1524670 - 152498711596.0
N-acetylmuramoyl-l-alanine amidaseCTDIVETGP_1521Not AvailableNegative1525098 - 152588628320.6
Hypothetical proteinCTDIVETGP_1522Not AvailableNegative1526072 - 152662319371.2

Displaying genes 1 – 10 of 3090 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

228 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001360methanesulfonateCH3O3SChemical structure of methanesulfonate59721-29-8
Average95.09Da
Monoisotopic94.980838711Da

Displaying 1–10 of 228 metabolites

Health Effects

No health effects information available for this bacterium.