Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | DORA_20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
537111 bp
Thymine Count
535319 bp
Guanine Count
594502 bp
Cytosine Count
603171 bp
Genome Length
2280313 bp
Protein-coding Genes
1973 genes
Non-Coding Genes
105 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ishne1 transposase | Q618_VCMC00001G0759 | Not Available | Negative | 849478 - 850158 | 25747.5 |
| transposase subunit b | Q618_VCMC00001G0760 | Not Available | Negative | 850252 - 850473 | 8646.68 |
| hypothetical protein | Q618_VCMC00001G0761 | Not Available | Negative | 850915 - 851100 | 6623.76 |
| hypothetical protein | Q618_VCMC00001G0762 | Not Available | Negative | 851553 - 852119 | 21259.3 |
| hypothetical protein | Q618_VCMC00001G0763 | Not Available | Negative | 852300 - 852467 | 5894.04 |
| hypothetical protein | Q618_VCMC00001G0764 | Not Available | Positive | 852529 - 852804 | 10342.4 |
| toxin-antitoxin system, toxin component, rele family | Q618_VCMC00001G0765 | Not Available | Positive | 852801 - 853082 | 10864.4 |
| hypothetical protein | Q618_VCMC00001G0766 | Not Available | Negative | 853220 - 853969 | 28298.6 |
| hypothetical protein | Q618_VCMC00001G0767 | Not Available | Negative | 853966 - 854301 | 12425.8 |
| transposase-like protein | Q618_VCMC00001G0768 | Not Available | Negative | 854607 - 854948 | 12656.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
