Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | vaginal mucosa |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
476439 bp
Thymine Count
468567 bp
Guanine Count
551316 bp
Cytosine Count
537929 bp
Genome Length
2036040 bp
Protein-coding Genes
1706 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Attl | Not Available | Not Available | + | 778098 - 778110 | Not Available |
| Putative regulator, gntr family | CJ240_03430 | Not Available | - | 790359 - 790730 | 13860.5 |
| Trna-pro; | Not Available | Not Available | + | 790895 - 790968 | Not Available |
| Trna-gly; | Not Available | Not Available | + | 791044 - 791117 | Not Available |
| Putative site-specific recombinase | CJ240_03445 | Not Available | - | 791365 - 792942 | 59652.8 |
| Site-specific recombinase | CJ240_03450 | Not Available | - | 792939 - 794189 | 46846.2 |
| hypothetical protein | CJ240_03455 | Not Available | - | 794248 - 794457 | 7567.11 |
| Endolysin | CJ240_03460 | Not Available | - | 794982 - 795791 | 29591.8 |
| Holin family protein | CJ240_03465 | Not Available | - | 795965 - 796519 | 19358.7 |
| Hypothetical protein | CJ240_03470 | Not Available | - | 796794 - 797231 | 15984.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
