Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | DORA_20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
537111 bp
Thymine Count
535319 bp
Guanine Count
594502 bp
Cytosine Count
603171 bp
Genome Length
2280313 bp
Protein-coding Genes
1973 genes
Non-Coding Genes
105 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Q618_VCMC00001G0709 | Not Available | Positive | 791211 - 792410 | 42424.6 |
| shikimate kinase and 3-dehydroquinate synthase | Q618_VCMC00001G0710 | Not Available | Positive | 793461 - 794135 | 24071.2 |
| shikimate kinase | Q618_VCMC00001G0711 | Not Available | Positive | 794128 - 794667 | 19628.7 |
| hypothetical protein | Q618_VCMC00001G0712 | Not Available | Positive | 794739 - 795302 | 21077.0 |
| n utilization substance protein b-like protein | Q618_VCMC00001G0713 | Not Available | Positive | 795309 - 795761 | 16867.9 |
| hypothetical protein | Q618_VCMC00001G0714 | Not Available | Positive | 795829 - 797127 | 46713.8 |
| hypothetical protein | Q618_VCMC00001G0715 | Not Available | Positive | 797137 - 797991 | 29590.3 |
| integration host factor mihf | Q618_VCMC00001G0716 | Not Available | Positive | 798091 - 798402 | 11332.9 |
| guanylate kinase | Q618_VCMC00001G0717 | Not Available | Positive | 798492 - 799043 | 19980.8 |
| dna-directed rna polymerase subunit omega | Q618_VCMC00001G0718 | Not Available | Positive | 799099 - 799374 | 9901.65 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
