Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | DORA_20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
537111 bp
Thymine Count
535319 bp
Guanine Count
594502 bp
Cytosine Count
603171 bp
Genome Length
2280313 bp
Protein-coding Genes
1973 genes
Non-Coding Genes
105 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Q618_VCMC00001G0619 | Not Available | Negative | 687638 - 688147 | 19829.4 |
| hypothetical protein | Q618_VCMC00001G0620 | Not Available | Negative | 688131 - 689444 | 47829.7 |
| hypothetical protein | Q618_VCMC00001G0621 | Not Available | Positive | 689630 - 690403 | 28130.4 |
| hypothetical protein | Q618_VCMC00001G0622 | Not Available | Positive | 690515 - 692440 | 70112.8 |
| 2-hydroxymuconic semialdehyde dehydrogenase | Q618_VCMC00001G0623 | Not Available | Negative | 692466 - 692699 | 8545.66 |
| ferredoxin | Q618_VCMC00001G0624 | Not Available | Positive | 692738 - 693064 | 11953.9 |
| hypothetical protein | Q618_VCMC00001G0625 | Not Available | Positive | 693148 - 694314 | 41476.4 |
| hypothetical protein | Q618_VCMC00001G0626 | Not Available | Positive | 694418 - 695761 | 49988.1 |
| integral membrane protein | Q618_VCMC00001G0627 | Not Available | Positive | 695865 - 696533 | 24130.1 |
| putative metal-dependent transcriptional regulator | Q618_VCMC00001G0628 | Not Available | Positive | 696550 - 697245 | 25007.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
