Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | DORA_20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
537111 bp
Thymine Count
535319 bp
Guanine Count
594502 bp
Cytosine Count
603171 bp
Genome Length
2280313 bp
Protein-coding Genes
1973 genes
Non-Coding Genes
105 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Q618_VCMC00001G0467 | Not Available | Positive | 506003 - 507316 | 49516.1 |
| hydrogenase 2 maturation protease | Q618_VCMC00001G0468 | Not Available | Positive | 507331 - 507975 | 22543.2 |
| hydrogenase nickel incorporation protein | Q618_VCMC00001G0469 | Not Available | Negative | 508041 - 508358 | 11442.4 |
| hypothetical protein | Q618_VCMC00001G0470 | Not Available | Positive | 508452 - 509708 | 45152.9 |
| hydrogenase assembly chaperone hypc/hupf | Q618_VCMC00001G0471 | Not Available | Positive | 509768 - 509995 | 8137.98 |
| hypothetical protein | Q618_VCMC00001G0472 | Not Available | Positive | 510087 - 510476 | 14105.3 |
| hypothetical protein | Q618_VCMC00001G0473 | Not Available | Positive | 510487 - 510855 | 13601.6 |
| putative 16s rrna methyltransferase | Q618_VCMC00001G0474 | Not Available | Negative | 511267 - 511917 | 23090.0 |
| hypothetical protein | Q618_VCMC00001G0475 | Not Available | Positive | 512000 - 513685 | 62495.9 |
| hypothetical protein | Q618_VCMC00001G0476 | Not Available | Positive | 513906 - 514133 | 6434.81 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
