Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | DORA_20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
537111 bp
Thymine Count
535319 bp
Guanine Count
594502 bp
Cytosine Count
603171 bp
Genome Length
2280313 bp
Protein-coding Genes
1973 genes
Non-Coding Genes
105 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Gp4, phage portal protein, hk97 family | Q618_VCMC00001G0218 | Not Available | Positive | 209106 - 210407 | 48450.6 |
| Putative clp peptidase | Q618_VCMC00001G0219 | Not Available | Positive | 210404 - 211267 | 31074.6 |
| Phage major capsid protein | Q618_VCMC00001G0220 | Not Available | Positive | 211282 - 212532 | 44115.0 |
| phage protein dna packaging protein | Q618_VCMC00001G0221 | Not Available | Positive | 212568 - 212885 | 11874.9 |
| phage head-tail adaptor | Q618_VCMC00001G0222 | Not Available | Positive | 212890 - 213219 | 11980.3 |
| hk97 family phage protein | Q618_VCMC00001G0223 | Not Available | Positive | 213222 - 213659 | 15423.5 |
| hypothetical protein | Q618_VCMC00001G0224 | Not Available | Positive | 213656 - 214000 | 12869.3 |
| Major tail protein | Q618_VCMC00001G0225 | Not Available | Positive | 214013 - 214597 | 20653.2 |
| Hypothetical protein | Q618_VCMC00001G0226 | Not Available | Positive | 214618 - 215034 | 15128.9 |
| acyl-coa thioester hydrolase | Q618_VCMC00001G0227 | Not Available | Negative | 215225 - 215893 | 24389.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
