Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Varibaculum
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Varibaculum |
| Species | Varibaculum cambriense |
| Strain | DORA_20 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
537111 bp
Thymine Count
535319 bp
Guanine Count
594502 bp
Cytosine Count
603171 bp
Genome Length
2280313 bp
Protein-coding Genes
1973 genes
Non-Coding Genes
105 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| riboflavin-specific deaminase | Q618_VCMC00001G0437 | Not Available | Positive | 474268 - 475332 | 37060.3 |
| riboflavin synthase subunit alpha | Q618_VCMC00001G0438 | Not Available | Positive | 475317 - 475910 | 20939.1 |
| hypothetical protein | Q618_VCMC00001G0439 | Not Available | Positive | 475910 - 477178 | 44431.9 |
| 6,7-dimethyl-8-ribityllumazine synthase | Q618_VCMC00001G0440 | Not Available | Positive | 477222 - 477695 | 16418.8 |
| hypothetical protein | Q618_VCMC00001G0441 | Not Available | Positive | 477845 - 478870 | 37282.7 |
| hypothetical protein | Q618_VCMC00001G0442 | Not Available | Positive | 478895 - 480001 | 39732.2 |
| rsme family rna methyltransferase | Q618_VCMC00001G0443 | Not Available | Positive | 480001 - 480783 | 27681.5 |
| hypothetical protein | Q618_VCMC00001G0444 | Not Available | Positive | 480785 - 481744 | 34691.0 |
| putative rrna maturation factor | Q618_VCMC00001G0445 | Not Available | Positive | 481741 - 482196 | 16709.9 |
| hypothetical protein | Q618_VCMC00001G0446 | Not Available | Positive | 482199 - 483494 | 47414.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
