Varibaculum cambriense DORA_20

Gram-positiveFacultative anaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Actinomycetales

Family

Actinomycetaceae

Genus

Varibaculum

Description

Varibaculum cambriense DORA_20 is a Gram-positive bacterium characterized as a facultative anaerobe, allowing it to thrive in both oxygen-rich and oxygen-poor environments. It possesses a single replicon, which is indicative of its genomic structure and potential stability in various conditions. The genomic information for this organism is cataloged under the accession AZMI00000000.1. The Gram-positive nature of Varibaculum cambriense DORA_20 suggests it has a thick peptidoglycan layer in its cell wall, which may contribute to its resilience in diverse habitats, including those with fluctuating oxygen levels. As a facultative anaerobe, it can adapt its metabolic processes depending on the availability of oxygen, utilizing aerobic respiration when oxygen is present and switching to fermentation or anaerobic respiration in its absence. This adaptability is crucial for survival in fluctuating ecological niches, potentially allowing Varibaculum cambriense DORA_20 to play a role in biogeochemical cycles, particularly in environments where organic matter is present. The ability to thrive under varying oxygen conditions may also facilitate its interactions with other microorganisms, contributing to microbial community dynamics and nutrient cycling. Understanding the traits of Varibaculum cambriense DORA_20 enhances our knowledge of microbial diversity and the ecological roles that such organisms may fulfill in their respective environments.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderActinomycetales
FamilyActinomycetaceae
GenusVaribaculum
SpeciesVaribaculum cambriense
StrainDORA_20

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Varibaculum cambriense DORA_20 Q618_VCMC00004, whole genome

Gene Summary

Adenine Count

537111 bp

Thymine Count

535319 bp

Guanine Count

594502 bp

Cytosine Count

603171 bp

Genome Length

2280313 bp

Protein-coding Genes

1973 genes

Non-Coding Genes

105 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
riboflavin-specific deaminaseQ618_VCMC00001G0437Not AvailablePositive474268 - 47533237060.3
riboflavin synthase subunit alphaQ618_VCMC00001G0438Not AvailablePositive475317 - 47591020939.1
hypothetical proteinQ618_VCMC00001G0439Not AvailablePositive475910 - 47717844431.9
6,7-dimethyl-8-ribityllumazine synthaseQ618_VCMC00001G0440Not AvailablePositive477222 - 47769516418.8
hypothetical proteinQ618_VCMC00001G0441Not AvailablePositive477845 - 47887037282.7
hypothetical proteinQ618_VCMC00001G0442Not AvailablePositive478895 - 48000139732.2
rsme family rna methyltransferaseQ618_VCMC00001G0443Not AvailablePositive480001 - 48078327681.5
hypothetical proteinQ618_VCMC00001G0444Not AvailablePositive480785 - 48174434691.0
putative rrna maturation factorQ618_VCMC00001G0445Not AvailablePositive481741 - 48219616709.9
hypothetical proteinQ618_VCMC00001G0446Not AvailablePositive482199 - 48349447414.4

Displaying genes 481 – 490 of 2078 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.