Photorhabdus temperata J3

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Photorhabdus

Description

Photorhabdus temperata J3 is a Gram-negative bacterium characterized by its rod shape and the presence of flagella, which contribute to its motility. This species is notable for having a single replicon, indicating a streamlined genomic organization that is typical of certain bacteria. Photorhabdus temperata J3 is represented in the sequence database under the accession number AXDT00000000.1. This bacterium is part of the family Enterobacteriaceae and is known for its association with nematodes, particularly in the context of biocontrol. The interplay between Photorhabdus species and their nematode partners allows for effective pathogenicity against insect hosts, making them of interest in biological pest control. The ability to produce various secondary metabolites further enhances their ecological role, providing a competitive advantage in their natural environments. The understanding of Photorhabdus temperata J3's biological traits, such as its Gram-negative nature and flagellar motility, highlights its adaptability and potential applications in agriculture. By utilizing its interactions with nematodes, researchers can explore sustainable methods for managing pest populations, underscoring the ecological significance of this bacterium in its native habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusPhotorhabdus
SpeciesPhotorhabdus temperata
StrainJ3

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Photorhabdus temperata J3
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photorhabdus temperata J3 Contig783, whole genome shotgun

Gene Summary

Adenine Count

1591813 bp

Thymine Count

1594687 bp

Guanine Count

1234960 bp

Cytosine Count

1240315 bp

Genome Length

5661799 bp

Protein-coding Genes

4931 genes

Non-Coding Genes

269 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
translation initiation factor if-2O185_00780Not AvailableNegative182354 - 18506299152.5
peptidase m54O185_00785Not AvailableNegative185087 - 18659556110.5
ribosome maturation protein rimpO185_00790Not AvailableNegative186617 - 18706916720.2
Trna-metNot AvailableNot AvailablePositive187281 - 187357Not Available
Trna-leuNot AvailableNot AvailablePositive187418 - 187506Not Available
preprotein translocase subunit secgO185_00805Not AvailableNegative187566 - 18790411603.2
dihydropteroate synthaseO185_00810Not AvailableNegative189413 - 19025830432.1
atp-dependent metalloproteaseO185_00815Not AvailableNegative190335 - 19227871218.5
23s rrna methyltransferaseO185_00820Not AvailableNegative192336 - 19296523612.6
rna-binding protein yhbyO185_00825Not AvailablePositive193103 - 19339610912.6

Displaying genes 411 – 420 of 5200 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.