Photorhabdus temperata J3

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Morganellaceae

Genus

Photorhabdus

Description

Photorhabdus temperata J3 is a Gram-negative bacterium characterized by its rod shape and the presence of flagella, which contribute to its motility. This species is notable for having a single replicon, indicating a streamlined genomic organization that is typical of certain bacteria. Photorhabdus temperata J3 is represented in the sequence database under the accession number AXDT00000000.1. This bacterium is part of the family Enterobacteriaceae and is known for its association with nematodes, particularly in the context of biocontrol. The interplay between Photorhabdus species and their nematode partners allows for effective pathogenicity against insect hosts, making them of interest in biological pest control. The ability to produce various secondary metabolites further enhances their ecological role, providing a competitive advantage in their natural environments. The understanding of Photorhabdus temperata J3's biological traits, such as its Gram-negative nature and flagellar motility, highlights its adaptability and potential applications in agriculture. By utilizing its interactions with nematodes, researchers can explore sustainable methods for managing pest populations, underscoring the ecological significance of this bacterium in its native habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyMorganellaceae
GenusPhotorhabdus
SpeciesPhotorhabdus temperata
StrainJ3

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Photorhabdus temperata J3
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photorhabdus temperata J3 Contig783, whole genome shotgun

Gene Summary

Adenine Count

1591813 bp

Thymine Count

1594687 bp

Guanine Count

1234960 bp

Cytosine Count

1240315 bp

Genome Length

5661799 bp

Protein-coding Genes

4931 genes

Non-Coding Genes

269 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptidase m23O185_00365Not AvailableNegative92572 - 9373240560.5
cell division protein ftsaO185_00370Not AvailableNegative93796 - 9505245248.5
cell division protein ftsqO185_00375Not AvailableNegative95092 - 9589830513.1
d-alanine--d-alanine ligaseO185_00380Not AvailableNegative95900 - 9682033170.8
udp-n-acetylmuramate--alanine ligaseO185_00385Not AvailableNegative96813 - 9836056237.0
udp-diphospho-muramoylpentapeptide beta-n- acetylglucosaminyltransferaseO185_00390Not AvailableNegative98344 - 9941138437.1
cell division protein ftswO185_00395Not AvailableNegative99408 - 10060143841.1
hypothetical proteinO185_00400Not AvailableNegative100601 - 1007475345.38
udp-n-acetylmuramoyl-l-alanyl-d-glutamate synthetaseO185_00405Not AvailableNegative100765 - 10191040730.2
phospho-n-acetylmuramoyl-pentapeptide- transferaseO185_00410Not AvailableNegative101913 - 10299539836.1

Displaying genes 331 – 340 of 5200 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.