Flavobacterium limnosediminis JC2902

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium limnosediminis JC2902 is a Gram-negative bacterium characterized by its aerobic metabolism and rod-shaped morphology. This species is non-motile, despite the presence of flagella, which may suggest a role in surface adherence or biofilm formation rather than in motility. The strain has a single replicon, indicating a streamlined genetic organization that is typical for many bacteria within the Flavobacterium genus. The accession number for Flavobacterium limnosediminis JC2902 is AVGG00000000.1, which serves as a unique identifier in genomic databases. This designation allows for further exploration of its genomic features and potential applications in microbiological research. In terms of ecological relevance, Flavobacterium species are often found in aquatic environments and are known for their role in the degradation of organic matter. This particular strain may contribute to nutrient cycling in limnic ecosystems, where it could assist in the breakdown of complex organic substances. The aerobic nature of the bacterium suggests it thrives in oxygen-rich environments, which aligns with its potential ecological roles in freshwater habitats. Understanding its specific interactions within these ecosystems could provide insights into the microbial dynamics and health of aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium limnosediminis
StrainJC2902

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium limnosediminis JC2902
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium limnosediminis JC2902 FLJC2902T_56, whole genome

Gene Summary

Adenine Count

1083512 bp

Thymine Count

1047439 bp

Guanine Count

640093 bp

Cytosine Count

695500 bp

Genome Length

3466544 bp

Protein-coding Genes

3117 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative metalloendopeptidaseFLJC2902T_21500Not AvailablePositive2312488 - 231453676996.9
hypothetical proteinFLJC2902T_21510Not AvailableNegative2314538 - 23147116608.17
hypothetical proteinFLJC2902T_21520Not AvailablePositive2314830 - 231607748561.4
udp-3-o-(3-hydroxymyristoyl)-glucosamine n-acyltransferaseFLJC2902T_21530Not AvailablePositive2316184 - 231720636848.9
udp-3-o-acyl-n-acetylglucosamine deacetylaseFLJC2902T_21540Not AvailablePositive2317224 - 231861250966.2
acyl-[acyl carrier protein]--udp-n-acetylglucosamine o-acyltransferaseFLJC2902T_21550Not AvailablePositive2318623 - 231940827952.9
elongation factor pFLJC2902T_21560Not AvailablePositive2319438 - 232000420663.6
udp-3-o-(3-hydroxymyristoyl) glucosamine n-acyltransferaseFLJC2902T_21570Not AvailablePositive2320091 - 232103233936.8
succinate--coa ligase, adp-forming (succinyl-coa synthetase, alpha subunit)FLJC2902T_21590Not AvailablePositive2321452 - 232237231991.0
hypothetical proteinFLJC2902T_21600Not AvailablePositive2322469 - 232360244097.2

Displaying genes 2091 – 2100 of 3168 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.