Flavobacterium limnosediminis JC2902

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium limnosediminis JC2902 is a Gram-negative bacterium characterized by its aerobic metabolism and rod-shaped morphology. This species is non-motile, despite the presence of flagella, which may suggest a role in surface adherence or biofilm formation rather than in motility. The strain has a single replicon, indicating a streamlined genetic organization that is typical for many bacteria within the Flavobacterium genus. The accession number for Flavobacterium limnosediminis JC2902 is AVGG00000000.1, which serves as a unique identifier in genomic databases. This designation allows for further exploration of its genomic features and potential applications in microbiological research. In terms of ecological relevance, Flavobacterium species are often found in aquatic environments and are known for their role in the degradation of organic matter. This particular strain may contribute to nutrient cycling in limnic ecosystems, where it could assist in the breakdown of complex organic substances. The aerobic nature of the bacterium suggests it thrives in oxygen-rich environments, which aligns with its potential ecological roles in freshwater habitats. Understanding its specific interactions within these ecosystems could provide insights into the microbial dynamics and health of aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium limnosediminis
StrainJC2902

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium limnosediminis JC2902
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium limnosediminis JC2902 FLJC2902T_56, whole genome

Gene Summary

Adenine Count

1083512 bp

Thymine Count

1047439 bp

Guanine Count

640093 bp

Cytosine Count

695500 bp

Genome Length

3466544 bp

Protein-coding Genes

3117 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinFLJC2902T_18970Not AvailablePositive2030006 - 203253495500.8
cold-shock dna-binding protein familyFLJC2902T_18980Not AvailablePositive2032874 - 20330657230.55
hypothetical proteinFLJC2902T_18990Not AvailablePositive2033197 - 203488566677.9
fic family proteinFLJC2902T_19000Not AvailableNegative2034902 - 203598441052.4
deoxyribonucleoside-triphosphataseFLJC2902T_19010Not AvailablePositive2036503 - 203707520857.7
putative rna helicase dead-box proteinFLJC2902T_19020Not AvailablePositive2037175 - 203907970868.8
hypothetical proteinFLJC2902T_19030Not AvailablePositive2039158 - 203992828682.7
putative trna/rrna methyltransferaseFLJC2902T_19040Not AvailableNegative2040031 - 204070225869.8
rna polymerase sigma-70 factorFLJC2902T_19050Not AvailablePositive2040760 - 204129020689.0
nad-dependent deacetylaseFLJC2902T_19070Not AvailablePositive2042274 - 204295725423.5

Displaying genes 1841 – 1850 of 3168 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.