Rathayibacter iranicus NCPPB 2253 = VKM Ac-1602

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Rathayibacter

Description

Rathayibacter iranicus NCPPB 2253, also known as VKM Ac-1602, is a Gram-positive bacterium characterized by its rod-shaped morphology. This species contains a single replicon, which is indicative of its genomic structure. The genomic data is accessible under the accession number QGDV00000000.1, providing a basis for further studies on its genetic composition. The classification of Rathayibacter iranicus within the broader context of microbiology underscores its relevance, particularly in relation to plant health and agricultural ecosystems. As a member of the Rathayibacter genus, it is known to be associated with certain plant diseases, specifically those affecting crops. Understanding the traits of Rathayibacter iranicus can contribute to the development of management practices aimed at mitigating its impact on agricultural productivity. In summary, Rathayibacter iranicus NCPPB 2253 exhibits key traits such as being Gram-positive and rod-shaped, with a single replicon and specific genomic information accessible for research. The ecological implications of this bacterium highlight its potential role in plant pathology, emphasizing the importance of continued research into its biology and interactions with plant hosts.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusRathayibacter
SpeciesRathayibacter iranicus
StrainNCPPB 2253 = VKM Ac-1602

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rathayibacter iranicus NCPPB 2253 = VKM Ac-1602 Ga0139025_149,

Gene Summary

Adenine Count

550663 bp

Thymine Count

558932 bp

Guanine Count

1135893 bp

Cytosine Count

1134793 bp

Genome Length

3380746 bp

Protein-coding Genes

3268 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
antimicrobial peptide system sdpa family proteinB0H03_101299Not AvailableNegative294944 - 29545918620.2
sdpc family antimicrobial peptideB0H03_101300Not AvailableNegative295518 - 29624024754.3
two-component system ompr family response regulatorB0H03_101301Not AvailablePositive297103 - 29786428236.0
two-component system ompr family sensor kinaseB0H03_101302Not AvailablePositive297861 - 29940554310.1
putative dehydrogenaseB0H03_101303Not AvailableNegative299642 - 30066435877.5
hypothetical proteinB0H03_101304Not AvailablePositive300763 - 3009697682.33
lpxtg-motif cell wall-anchored proteinB0H03_101305Not AvailablePositive300979 - 303990103860.0
hypothetical proteinB0H03_101306Not AvailablePositive304063 - 30466218764.7
hydroxymethylpyrimidine pyrophosphatase-like had family hydrolaseB0H03_101307Not AvailablePositive304765 - 30571234314.8
udp-glucose 4-epimeraseB0H03_101308Not AvailablePositive305759 - 30661030967.7

Displaying genes 301 – 310 of 3318 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.